Oh...legacy account. Yeah old cPanel accounts used to do that (put addon docroots inside the main domain docroot). We typically recommend just resetting the account if its old enough to be set up that way because of all the weird bugs these accounts usually have, but the fact you both would lose your legacy .org domain (the new account would be keibeeit.heliohost.us since the .org ones are now limited to staff), have third party email DNS set up manually by us, and have an (also really old) Lily account attached to it that would need to be manually fixed after resetting make resetting kind of impractical if the account otherwise works.
The document root for domain keibee-it.com has been moved to ~/keibee-it.com for you and will take effect within the next 2 hours. It may show a 404 error or other strange behavior until then.